BioinformaticsPlus > 3D-SPECS > Search

3D Structural Proteomics Explorer with Crystallisation Scores

Crystallisation predictions for the entire human proteome

Jump to Entry: Enter Gene ID or 3D-SPECS ID (e.g. 1 or GDB1A)

Advanced Search Tools

Target and Domain Text Search
SEARCH TERM:
Result Type: Examples:
HUGO Name (Contains)
Protein Description (Contains)
3D-SPECS ID (Exact)
Genbank ID (Exact)
Gene ID (Exact)
PFAM Domain ID (Contains)
3D-SPECS ID = GDB2A
Domain ID = adh_short
HUGO Name = CBR1
Description = macrophage

BLAST Search against
Enter a SINGLE sequence below in FASTA format

 

Advanced Options:
Expect    Matrix    View
Descriptions    Alignments    Color schema
Low Complexity Filter    Perform ungapped alignment    Graphical Overview

Example search 1:
Type 'adh_short' into the SEARCH TERM BOX (Short-chain dehydrogenase/reductase family)
Click on the button for 'PFAM Domain ID' and Hit Submit
This brings up 56 domain entries (if you got no results - remember to select 'PFAM Domain ID' as the type of search)

Example search 2:
Type 'CDK2' into the SEARCH TERM BOX
Click on the button for 'HUGO Name' and Hit Submit
This brings up 3 target entries (HUGO names = CDK2, CDK2AP1 and CDK2AP2)
There are different domain types 'Pkinase' and 'CDK2AP' - click on these links to explore these domain families in more detail