BioinformaticsPlus > 3D-SPECS > GDB1296A

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IDENTIFIERS: GDB1296A | COL8A2 | gi|32964830 | GeneID=1296 | Length=703 | TM=0
DESCRIPTION: collagen, type VIII, alpha 2 [Homo sapiens].
MGC STATUS: NO

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB1296A gi|32964830 1 24 230 PF09770:PAT1 PFAM 3e-07
(24.7%)
No match above 50 percent sequence identity
GDB1296A gi|32964830 2 379 535 PF05642:Sporozoite_P67 PFAM 5e-04
(23.9%)
No match above 50 percent sequence identity
GDB1296A gi|32964830 3 576 700 PF00386:C1q PFAM 2e-43
(100.0%)
PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1O91_C SeqId=74.4 QR=1-125/125 QOV=100.0 MR=51-175/178 MOV=70.2]

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB1296A gi|32964830 1 75 161 5 3BOGA0 CERT No match above 50 percent sequence identity
GDB1296A gi|32964830 2 175 576 5 1S58A0 HIGH No match above 50 percent sequence identity
GDB1296A gi|32964830 3 573 703 1 1O91A0 CERT PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1O91_C SeqId=74.2 QR=3-130/131 QOV=97.7 MR=3-130/131 MOV=97.7]

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult