BioinformaticsPlus > 3D-SPECS > GDB200315A

BLAST against:

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IDENTIFIERS: GDB200315A | APOBEC3A | gi|21955158 | GeneID=200315 | Length=199 | TM=0
DESCRIPTION: phorbolin 1 [Homo sapiens].
MGC STATUS: YES [BC126416:CM18-A11 SeqId=100.0 Overlap=100.0 QR=1-199/199 MR=1-199/199]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB200315A gi|21955158 1 11 131 PF08210:APOBEC_N PFAM 5e-39
(100.0%)
PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_ATOM|3IR2_B SeqId=58.9 QR=1-121/121 QOV=100.0 MR=18-139/207 MOV=58.9]
GDB200315A gi|21955158 2 133 187 PF05240:APOBEC_C PFAM 3e-23
(100.0%)
PDB80-95:QOV>=50:MOV<50
[gnl|PDB_ATOM|2KBO_A SeqId=80.4 QR=5-55/55 QOV=92.7 MR=132-182/194 MOV=26.3]

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB200315A gi|21955158 1 10 196 1 3IR2A0 CERT PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_ATOM|2KBO_A SeqId=65.3 QR=1-187/187 QOV=100.0 MR=4-191/194 MOV=96.9]

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult