BioinformaticsPlus > 3D-SPECS > GDB2194A

BLAST against:

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IDENTIFIERS: GDB2194A | FASN | gi|41872631 | GeneID=2194 | Length=2511 | TM=0
DESCRIPTION: fatty acid synthase [Homo sapiens].
MGC STATUS: YES [BC063242:AT78-A10 SeqId=100.0 Overlap=100.0 QR=1-2511/2511 MR=1-2511/2511]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB2194A gi|41872631 1 1 239 PF00109:ketoacyl-synt PFAM 1e-68
(100.0%)
PDB95-100:QOV>=50:MOV<50
[gnl|PDB_ATOM|3HHD_D SeqId=100.0 QR=2-239/239 QOV=99.6 MR=4-241/965 MOV=24.7]
GDB2194A gi|41872631 2 243 360 PF02801:Ketoacyl-synt_C PFAM 1e-36
(100.0%)
PDB95-100:QOV>=50:MOV<50
[gnl|PDB_ATOM|3HHD_D SeqId=100.0 QR=1-118/118 QOV=100.0 MR=245-362/965 MOV=12.2]
GDB2194A gi|41872631 3 493 810 PF00698:Acyl_transf_1 PFAM 1e-100
(100.0%)
PDB95-100:QOV>=50:MOV<50
[gnl|PDB_ATOM|3HHD_D SeqId=100.0 QR=1-318/318 QOV=100.0 MR=495-812/965 MOV=33.0]
GDB2194A gi|41872631 4 1243 1342 PF08242:Methyltransf_12 PFAM 2e-09
(100.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|2VZ9_B SeqId=72.0 QR=1-100/100 QOV=100.0 MR=1245-1344/2512 MOV=4.0]
GDB2194A gi|41872631 5 1667 1816 PF00107:ADH_zinc_N PFAM 3e-19
(100.0%)
PDB80-95:QOV>=50:MOV<50
[gnl|PDB_ATOM|2VZ9_B SeqId=84.7 QR=1-150/150 QOV=100.0 MR=1667-1816/2512 MOV=6.0]
GDB2194A gi|41872631 6 1885 2053 PF00106:adh_short PFAM 1e-44
(100.0%)
PDB80-95:QOV>=50:MOV<50
[gnl|PDB_ATOM|2VZ9_B SeqId=87.0 QR=1-169/169 QOV=100.0 MR=1885-2053/2512 MOV=6.7]
GDB2194A gi|41872631 7 2125 2190 PF00550:PP-binding PFAM 8e-09
(98.5%)
PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|2CG5_B SeqId=98.5 QR=1-66/66 QOV=100.0 MR=9-74/91 MOV=72.5]
GDB2194A gi|41872631 8 2242 2501 PF00975:Thioesterase PFAM 2e-37
(100.0%)
PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|2PX6_B SeqId=100.0 QR=1-260/260 QOV=100.0 MR=47-306/316 MOV=82.3]

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB2194A gi|41872631 1 2 963 5 3HHDD0 PDB95-100:BLAST PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_SEQRES|3HHD_D SeqId=100.0 QR=1-962/962 QOV=100.0 MR=4-965/965 MOV=99.7]
GDB2194A gi|41872631 2 964 1219 4 N/A N/A PDB50-80:QOV>=50:MOV<50
[gnl|PDB_SEQRES|2VZ9_A SeqId=68.9 QR=1-256/256 QOV=100.0 MR=965-1221/2512 MOV=10.2]
GDB2194A gi|41872631 3 1220 1408 2 N/A N/A PDB50-80:QOV>=50:MOV<50
[gnl|PDB_SEQRES|2VZ9_A SeqId=72.0 QR=1-189/189 QOV=100.0 MR=1222-1409/2512 MOV=7.5]
GDB2194A gi|41872631 4 1398 1525 4 N/A N/A PDB50-80:QOV>=50:MOV<50
[gnl|PDB_SEQRES|2VZ9_A SeqId=78.1 QR=1-128/128 QOV=100.0 MR=1399-1525/2512 MOV=5.1]
GDB2194A gi|41872631 5 1528 1857 1 3GMSA0 CERT PDB50-80:QOV>=50:MOV<50
[gnl|PDB_SEQRES|2VZ9_A SeqId=78.7 QR=1-329/330 QOV=99.7 MR=1528-1856/2512 MOV=13.1]
GDB2194A gi|41872631 6 1884 2063 4 1EDOA0 CERT PDB80-95:QOV>=50:MOV<50
[gnl|PDB_SEQRES|2VZ9_A SeqId=87.8 QR=1-180/180 QOV=100.0 MR=1884-2063/2512 MOV=7.2]
GDB2194A gi|41872631 7 2119 2207 4 2PNGA0 CERT PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_SEQRES|2CG5_B SeqId=98.9 QR=1-89/89 QOV=100.0 MR=3-91/91 MOV=97.8]
GDB2194A gi|41872631 8 2200 2511 2 2PX6B0 PDB95-100:BLAST PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_SEQRES|2PX6_B SeqId=100.0 QR=1-312/312 QOV=100.0 MR=5-316/316 MOV=98.7]

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult