BioinformaticsPlus > 3D-SPECS > GDB25886A

BLAST against:

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IDENTIFIERS: GDB25886A | WDR51A | gi|31377770 | GeneID=25886 | Length=407 | TM=0
DESCRIPTION: WD repeat domain 51A [Homo sapiens].
MGC STATUS: PARTIAL [BC007417:AU27-A2 SeqId=99.7 Overlap=89.4 QR=44-407/407 MR=1-364/364]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB25886A gi|31377770 1 10 47 PF00400:WD40 PFAM 8e-06
(97.4%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|3DM0_A SeqId=50.0 QR=7-38/38 QOV=84.2 MR=514-547/694 MOV=4.9]
GDB25886A gi|31377770 2 55 88 PF00400:WD40 PFAM 1e-08
(87.2%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|2GNQ_A SeqId=50.0 QR=1-34/34 QOV=100.0 MR=41-74/336 MOV=10.1]
GDB25886A gi|31377770 3 97 130 PF00400:WD40 PFAM 6e-06
(87.2%)
No match above 50 percent sequence identity
GDB25886A gi|31377770 4 136 173 PF00400:WD40 PFAM 6e-08
(97.4%)
No match above 50 percent sequence identity
GDB25886A gi|31377770 5 177 215 PF00400:WD40 PFAM 5e-07
(100.0%)
No match above 50 percent sequence identity
GDB25886A gi|31377770 6 220 255 PF00400:WD40 PFAM 2e-05
(92.3%)
No match above 50 percent sequence identity
GDB25886A gi|31377770 7 261 299 PF00400:WD40 PFAM 1e-05
(100.0%)
No match above 50 percent sequence identity

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB25886A gi|31377770 1 1 299 1 1GOTB0 CERT No match above 50 percent sequence identity

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult