BioinformaticsPlus > 3D-SPECS > GDB389208A

BLAST against:

Jump to Entry:

IDENTIFIERS: GDB389208A | TMPRSS11F | gi|194018492 | GeneID=389208 | Length=438 | TM=1
DESCRIPTION: transmembrane protease, serine 11F [Homo sapiens].
MGC STATUS: NO

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB389208A gi|194018492 1 57 166 PF01390:SEA PFAM 1e-18
(99.1%)
No match above 50 percent sequence identity
GDB389208A gi|194018492 2 206 432 PF00089:Trypsin PFAM 4e-59
(100.0%)
PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_ATOM|2OQ5_A SeqId=57.9 QR=1-227/227 QOV=100.0 MR=1-226/232 MOV=97.4]

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB389208A gi|194018492 1 1 209 5 N/A N/A No match above 50 percent sequence identity
GDB389208A gi|194018492 2 206 438 1 2OQ5A0 CERT PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_ATOM|2OQ5_A SeqId=58.1 QR=1-233/233 QOV=100.0 MR=1-232/232 MOV=100.0]

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult