BioinformaticsPlus > 3D-SPECS > GDB57182A

BLAST against:

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IDENTIFIERS: GDB57182A | ANKRD50 | gi|62988328 | GeneID=57182 | Length=1429 | TM=0
DESCRIPTION: ankyrin repeat domain 50 [Homo sapiens].
MGC STATUS: PARTIAL [BC024725:AT41-E3 SeqId=100.0 Overlap=52.0 QR=687-1429/1429 MR=1-743/743]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB57182A gi|62988328 1 544 575 PF00023:Ank PFAM 0.004
(97.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|1N0R_A SeqId=53.1 QR=1-32/32 QOV=100.0 MR=1-32/126 MOV=25.4]
GDB57182A gi|62988328 2 577 608 PF00023:Ank PFAM 4e-05
(97.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|2XEN_A SeqId=50.0 QR=1-32/32 QOV=100.0 MR=34-65/91 MOV=35.2]
GDB57182A gi|62988328 3 645 675 PF00023:Ank PFAM 0.004
(93.9%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|1AWC_B SeqId=56.7 QR=1-30/31 QOV=96.8 MR=68-97/153 MOV=19.6]
GDB57182A gi|62988328 4 676 707 PF00023:Ank PFAM 4e-05
(97.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|2P2C_U SeqId=62.5 QR=1-32/32 QOV=100.0 MR=112-143/169 MOV=18.9]
GDB57182A gi|62988328 5 709 746 PF00023:Ank PFAM 0.004
(100.0%)
No match above 50 percent sequence identity
GDB57182A gi|62988328 6 747 779 PF00023:Ank PFAM 3e-06
(100.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|2XEN_A SeqId=54.5 QR=1-33/33 QOV=100.0 MR=34-66/91 MOV=36.3]
GDB57182A gi|62988328 7 780 811 PF00023:Ank PFAM 0.007
(97.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|1N0Q_B SeqId=56.2 QR=1-32/32 QOV=100.0 MR=1-32/93 MOV=34.4]
GDB57182A gi|62988328 8 813 845 PF00023:Ank PFAM 0.009
(100.0%)
No match above 50 percent sequence identity
GDB57182A gi|62988328 9 847 878 PF00023:Ank PFAM 2e-04
(97.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|2BKK_D SeqId=54.8 QR=1-31/32 QOV=96.9 MR=80-110/169 MOV=18.3]
GDB57182A gi|62988328 10 912 943 PF00023:Ank PFAM 2e-04
(97.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|1AWC_B SeqId=63.3 QR=3-32/32 QOV=93.8 MR=68-97/153 MOV=19.6]
GDB57182A gi|62988328 11 978 1010 PF00023:Ank PFAM 1e-05
(100.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|2P2C_U SeqId=56.2 QR=1-32/33 QOV=97.0 MR=112-143/169 MOV=18.9]
GDB57182A gi|62988328 12 1044 1075 PF00023:Ank PFAM 6e-06
(97.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|2P2C_U SeqId=58.1 QR=2-32/32 QOV=96.9 MR=80-110/169 MOV=18.3]
GDB57182A gi|62988328 13 1112 1303 PF09726:Macoilin PFAM 2e-04
(29.9%)
No match above 50 percent sequence identity

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB57182A gi|62988328 1 12 396 4 2QENA0 CERT No match above 50 percent sequence identity
GDB57182A gi|62988328 2 397 478 3 N/A N/A No match above 50 percent sequence identity
GDB57182A gi|62988328 3 479 546 5 1N0QA0 HIGH No match above 50 percent sequence identity
GDB57182A gi|62988328 4 544 697 1 2QYJA0 CERT No match above 50 percent sequence identity
GDB57182A gi|62988328 5 747 837 3 1N0QB0 PDB50-80:BLAST PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1N0R_A SeqId=53.8 QR=1-91/91 QOV=100.0 MR=1-91/126 MOV=72.2]
GDB57182A gi|62988328 6 838 979 4 N/A N/A No match above 50 percent sequence identity
GDB57182A gi|62988328 7 980 1070 2 1N0QA0 CERT No match above 50 percent sequence identity

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult