BioinformaticsPlus > 3D-SPECS > GDB63893A

BLAST against:

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IDENTIFIERS: GDB63893A | UBE2O | gi|192449449 | GeneID=63893 | Length=1292 | TM=0
DESCRIPTION: ubiquitin-conjugating enzyme E2O [Homo sapiens].
MGC STATUS: PARTIAL [BC051868:AT78-C12 SeqId=100.0 Overlap=57.4 QR=552-1292/1292 MR=1-741/741]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB63893A gi|192449449 1 9 33 PF10138:Tellurium_res PFAM 0.002
(25.5%)
No match above 50 percent sequence identity
GDB63893A gi|192449449 2 395 519 PF07263:DMP1 PFAM 0.004
(24.8%)
No match above 50 percent sequence identity
GDB63893A gi|192449449 3 958 1108 PF00179:UQ_con PFAM 2e-22
(99.3%)
No match above 50 percent sequence identity

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB63893A gi|192449449 1 1 336 5 1HXS10 HIGH No match above 50 percent sequence identity
GDB63893A gi|192449449 2 497 745 5 2FFKA0 HIGH No match above 50 percent sequence identity
GDB63893A gi|192449449 3 849 949 5 N/A N/A No match above 50 percent sequence identity
GDB63893A gi|192449449 4 950 1115 1 1JASA0 CERT No match above 50 percent sequence identity

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult