BioinformaticsPlus > 3D-SPECS > GDB6478A

BLAST against:

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IDENTIFIERS: GDB6478A | SIAH2 | gi|31982899 | GeneID=6478 | Length=324 | TM=0
DESCRIPTION: seven in absentia homolog 2 [Homo sapiens].
MGC STATUS: YES [BC013082:AT13-G11 SeqId=100.0 Overlap=100.0 QR=1-324/324 MR=1-324/324]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB6478A gi|31982899 1 4 73 PF07001:BAT2_N PFAM 7e-04
(37.0%)
No match above 50 percent sequence identity
GDB6478A gi|31982899 2 130 318 PF03145:Sina PFAM 3e-78
(100.0%)
PDB80-95:QOV>=50:MOV>=50
[gnl|PDB_ATOM|2A25_A SeqId=86.8 QR=1-189/189 QOV=100.0 MR=1-189/193 MOV=97.9]

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB6478A gi|31982899 1 20 63 5 1CGDA0 HIGH No match above 50 percent sequence identity
GDB6478A gi|31982899 2 60 163 3 3HCTA0 HIGH PDB50-80:QOV<50:MOV<50
[gnl|PDB_SEQRES|2A25_A SeqId=64.7 QR=71-104/104 QOV=32.7 MR=1-34/193 MOV=17.6]
GDB6478A gi|31982899 3 165 322 1 2A25A0 CERT PDB80-95:QOV>=50:MOV>=50
[gnl|PDB_SEQRES|2A25_A SeqId=91.1 QR=1-158/158 QOV=100.0 MR=36-193/193 MOV=81.9]

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult