BioinformaticsPlus > 3D-SPECS > GDB653111A

BLAST against:

Jump to Entry:

IDENTIFIERS: GDB653111A | LOC653111 | gi|89034201 | GeneID=653111 | Length=452 | TM=0
DESCRIPTION: PREDICTED: similar to ring finger protein 18 [Homo sapiens].
MGC STATUS: YES [BC126470:CM19-B2 SeqId=100.0 Overlap=100.0 QR=1-452/452 MR=1-452/452];
YES [BC075020:AT116-B9 SeqId=99.6 Overlap=100.0 QR=1-452/452 MR=1-452/452];
YES [BC075019:AT115-A4 SeqId=99.6 Overlap=100.0 QR=1-452/452 MR=1-452/452]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB653111A gi|89034201 1 15 55 PF00097:zf-C3HC4 PFAM 0.002
(100.0%)
No match above 50 percent sequence identity
GDB653111A gi|89034201 2 89 129 PF00643:zf-B_box PFAM 0.002
(97.6%)
No match above 50 percent sequence identity
GDB653111A gi|89034201 3 338 449 PF00622:SPRY PFAM 6e-10
(88.7%)
No match above 50 percent sequence identity

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB653111A gi|89034201 1 1 94 4 1JM7A0 CERT No match above 50 percent sequence identity
GDB653111A gi|89034201 2 123 260 5 2OTOA0 HIGH No match above 50 percent sequence identity
GDB653111A gi|89034201 3 279 452 1 2VOKA0 CERT No match above 50 percent sequence identity

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult