BioinformaticsPlus > 3D-SPECS > GDB8398A

BLAST against:

Jump to Entry:

IDENTIFIERS: GDB8398A | PLA2G6 | gi|52486194 | GeneID=8398 | Length=806 | TM=0
DESCRIPTION: phospholipase A2, group VI isoform a [Homo sapiens].
MGC STATUS: YES [BC036742:AT69-D5 SeqId=100.0 Overlap=100.0 QR=1-806/806 MR=1-806/806]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB8398A gi|52486194 1 219 248 PF00023:Ank PFAM 6e-04
(90.9%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|1N11_A SeqId=56.7 QR=1-30/30 QOV=100.0 MR=244-273/437 MOV=6.9]
GDB8398A gi|52486194 2 286 311 PF00023:Ank PFAM 0.006
(87.9%)
No match above 50 percent sequence identity
GDB8398A gi|52486194 3 317 346 PF00023:Ank PFAM 2e-04
(90.9%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|1QYM_A SeqId=50.0 QR=1-30/30 QOV=100.0 MR=107-136/227 MOV=13.2]
GDB8398A gi|52486194 4 349 381 PF00023:Ank PFAM 6e-05
(100.0%)
No match above 50 percent sequence identity
GDB8398A gi|52486194 5 481 665 PF01734:Patatin PFAM 3e-34
(100.0%)
No match above 50 percent sequence identity

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB8398A gi|52486194 1 29 425 1 1N11A0 CERT No match above 50 percent sequence identity
GDB8398A gi|52486194 2 477 806 2 1OXWA0 CERT No match above 50 percent sequence identity

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult