BioinformaticsPlus > 3D-SPECS > GDB8785A

BLAST against:

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IDENTIFIERS: GDB8785A | MATN4 | gi|13699830 | GeneID=8785 | Length=581 | TM=0
DESCRIPTION: matrilin 4 isoform 1 precursor [Homo sapiens].
MGC STATUS: NO

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB8785A gi|13699830 1 34 205 PF00092:VWA PFAM 9e-45
(97.8%)
No match above 50 percent sequence identity
GDB8785A gi|13699830 2 216 254 PF07645:EGF_CA PFAM 0.002
(97.6%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|1Z6C_A SeqId=51.2 QR=1-39/39 QOV=100.0 MR=45-83/87 MOV=44.8]
GDB8785A gi|13699830 3 345 520 PF00092:VWA PFAM 2e-48
(100.0%)
No match above 50 percent sequence identity
GDB8785A gi|13699830 4 535 578 PF10393:Matrilin_ccoil PFAM 6e-09
(100.0%)
No match above 50 percent sequence identity

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB8785A gi|13699830 1 20 220 2 1IJBA0 CERT No match above 50 percent sequence identity
GDB8785A gi|13699830 2 221 341 5 N/A N/A No match above 50 percent sequence identity
GDB8785A gi|13699830 3 342 527 1 1N3YA0 CERT No match above 50 percent sequence identity

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult