BioinformaticsPlus > 3D-SPECS > GDB90249A

BLAST against:

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IDENTIFIERS: GDB90249A | UNC5A | gi|62243567 | GeneID=90249 | Length=842 | TM=1
DESCRIPTION: netrin receptor Unc5h1 [Homo sapiens].
MGC STATUS: NO

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB90249A gi|62243567 1 151 239 PF07679:I-set PFAM 2e-07
(97.8%)
No match above 50 percent sequence identity
GDB90249A gi|62243567 2 246 293 PF00090:TSP_1 PFAM 3e-04
(100.0%)
No match above 50 percent sequence identity
GDB90249A gi|62243567 3 439 542 PF00791:ZU5 PFAM 1e-40
(100.0%)
PDB50-80:QOV>=50:MOV<50
[gnl|PDB_ATOM|3G5B_A SeqId=54.5 QR=7-104/104 QOV=94.2 MR=7-104/405 MOV=24.2]
GDB90249A gi|62243567 4 761 832 PF00531:Death PFAM 7e-10
(90.4%)
PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1WMG_F SeqId=54.9 QR=1-71/72 QOV=98.6 MR=18-88/103 MOV=68.9]

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB90249A gi|62243567 1 40 240 1 2VR9A0 CERT No match above 50 percent sequence identity
GDB90249A gi|62243567 2 285 427 5 N/A N/A No match above 50 percent sequence identity
GDB90249A gi|62243567 3 439 839 4 3G5BA0 CERT PDB50-80:QOV>=50:MOV>=50
[gnl|PDB_SEQRES|3G5B_A SeqId=54.6 QR=7-393/401 QOV=96.5 MR=7-394/405 MOV=95.8]

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult