BioinformaticsPlus > 3D-SPECS > GDB9938A

BLAST against:

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IDENTIFIERS: GDB9938A | ARHGAP25 | gi|55770898 | GeneID=9938 | Length=645 | TM=0
DESCRIPTION: Rho GTPase activating protein 25 isoform a [Homo sapiens].
MGC STATUS: PARTIAL [BC039591:AT71-D11 SeqId=99.7 Overlap=58.9 QR=20-399/645 MR=13-393/458]

Pfam Domain Diagram

Domain Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
PFAM IDENTIFIER
(Click to display all human targets with this domain type)
PFAM
WEBSITE
(External Link)
MATCH
E-VALUE
(OVERLAP)
PDB
STATUS
GDB9938A gi|55770898 1 47 150 PF00169:PH PFAM 8e-18
(99.0%)
PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1V89_A SeqId=100.0 QR=1-104/104 QOV=100.0 MR=8-111/118 MOV=88.1]
GDB9938A gi|55770898 2 177 326 PF00620:RhoGAP PFAM 5e-43
(98.0%)
No match above 50 percent sequence identity
GDB9938A gi|55770898 3 564 638 PF08614:ATG16 PFAM 0.003
(40.2%)
No match above 50 percent sequence identity

Crystallisation Information

3D-SPECS
ID
GENBANK
GI
INDEX START
RESIDUE
STOP
RESIDUE
XTALPRED
CLASS
PDB TEMPLATE CONFIDENCE TOP PDB MATCH
GDB9938A gi|55770898 1 47 152 5 1V89A0 PDB95-100:BLAST PDB95-100:QOV>=50:MOV>=50
[gnl|PDB_ATOM|1V89_A SeqId=99.1 QR=1-106/106 QOV=100.0 MR=8-113/118 MOV=89.8]
GDB9938A gi|55770898 2 151 353 1 1TX4A0 CERT No match above 50 percent sequence identity

Crystallisation Class Key

1 Optimal
2 Suboptimal
3 Average
4 Difficult
5 Very difficult